Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | AFIC_002600 | P23222 | + | 2693421 - 2694947 | 56043.7 |
| response regulator fixj | AFIC_002601 | P23221 | + | 2694937 - 2695554 | 22244.2 |
| response regulator | AFIC_002602 | P26487 | + | 2695627 - 2696025 | 14501.4 |
| helix-turn-helix domain-containing protein | AFIC_002603 | P26488 | + | 2696143 - 2696841 | 25447.8 |
| nnrs family protein | AFIC_002604 | Not Available | - | 2696814 - 2698037 | 43500.6 |
| hypothetical protein | AFIC_002605 | Not Available | - | 2698114 - 2698236 | 4550.82 |
| cytochrome-c oxidase, cbb3-type subunit i | AFIC_002606 | Q03073 | + | 2698607 - 2700259 | 61882.8 |
| cytochrome-c oxidase, cbb3-type subunit ii | AFIC_002607 | Not Available | + | 2700264 - 2701019 | 27766.0 |
| cbb3-type cytochrome c oxidase subunit 3 | AFIC_002608 | Not Available | + | 2701016 - 2701204 | 7016.23 |
| cytochrome-c oxidase, cbb3-type subunit iii | AFIC_002609 | A4YQU0 | + | 2701211 - 2702092 | 32165.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
