Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1810 domain-containing protein | AFIC_000228 | Not Available | + | 245793 - 246227 | 15929.1 |
| secondary thiamine-phosphate synthase enzyme yjbq | AFIC_000229 | P74125 | + | 246224 - 246694 | 16898.3 |
| duf2239 family protein | AFIC_000230 | Not Available | - | 246691 - 247275 | 21542.7 |
| nad(p)-dependent oxidoreductase | AFIC_000231 | Q6PAY8 | - | 247348 - 248229 | 31095.9 |
| gamma-glutamyltransferase | AFIC_000232 | P18956 | - | 248248 - 249957 | 59920.6 |
| mfs transporter | AFIC_000233 | P42306 | + | 250074 - 251471 | 48852.7 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | AFIC_000234 | Q89WU7 | - | 251468 - 253060 | 55705.6 |
| heparinase ii/iii family protein | AFIC_000235 | A0A0H3C3S1 | - | 253167 - 254915 | 64087.2 |
| hypothetical protein | AFIC_000236 | Q9CKP7 | - | 255031 - 256371 | 48048.2 |
| duf1674 domain-containing protein | AFIC_000237 | Q9VLU6 | + | 256545 - 256787 | 8516.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
