Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alternative oxidase | AFIC_002540 | O23913 | - | 2632197 - 2632859 | 25141.5 |
| crp/fnr family transcriptional regulator | AFIC_002541 | Q5SID7 | + | 2633143 - 2633841 | 25522.7 |
| hypothetical protein | AFIC_002542 | Not Available | - | 2633868 - 2634023 | 5425.91 |
| cytochrome c oxidase subunit iv family protein | AFIC_002543 | Not Available | - | 2634020 - 2634328 | 10821.8 |
| cytochrome c oxidase subunit 3 | AFIC_002544 | Q06475 | - | 2634331 - 2634975 | 23573.3 |
| cytochrome c | AFIC_002545 | O50651 | + | 2635131 - 2635583 | 16929.9 |
| cbb3-type cytochrome c oxidase subunit i | AFIC_002546 | P98008 | + | 2635597 - 2636946 | 51044.6 |
| cbbq/nirq/norq/gpvn family protein | AFIC_002547 | Q51664 | + | 2636975 - 2637784 | 29606.8 |
| vwa domain-containing protein | AFIC_002548 | Q2YJT9 | + | 2637792 - 2639696 | 71009.9 |
| formylglycine-generating enzyme family protein | AFIC_002549 | Q8R0F3 | - | 2639763 - 2640653 | 32636.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
