Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter permease | AFIC_002530 | P70795 | - | 2623958 - 2625508 | 54343.1 |
| tripartite tricarboxylate transporter tctb family protein | AFIC_002531 | Not Available | - | 2625519 - 2626109 | 21102.5 |
| hypothetical protein | AFIC_002532 | Not Available | - | 2626139 - 2626684 | 19806.7 |
| tripartite tricarboxylate transporter substrate-binding protein | AFIC_002533 | P0A177 | - | 2626686 - 2627105 | 14531.6 |
| hypothetical protein | AFIC_002534 | O34508 | + | 2627242 - 2628333 | 39703.9 |
| iclr family transcriptional regulator | AFIC_002535 | Q0K846 | + | 2628361 - 2629140 | 29030.1 |
| lysr family transcriptional regulator | AFIC_002536 | P71025 | + | 2629158 - 2630069 | 32829.1 |
| glutathione s-transferase family protein | AFIC_002537 | P0A9D3 | - | 2630040 - 2630666 | 23396.1 |
| 6-carboxytetrahydropterin synthase qued | AFIC_002538 | P65871 | - | 2631070 - 2631438 | 14086.7 |
| pseudoazurin | AFIC_002539 | P19567 | - | 2631615 - 2632100 | 17160.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
