Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter | AFIC_000218 | P69680 | - | 237228 - 238703 | 50587.5 |
| p-ii family nitrogen regulator | AFIC_000219 | O54053 | - | 238744 - 239082 | 12036.6 |
| ammonium transporter | AFIC_000220 | Q07429 | - | 239443 - 240756 | 45568.2 |
| p-ii family nitrogen regulator | AFIC_000221 | O54053 | - | 240801 - 241139 | 12236.9 |
| acyl-coa thioesterase ii | AFIC_000222 | P0AGG3 | - | 241257 - 242141 | 32765.0 |
| ubiquinone biosynthesis hydroxylase | AFIC_000223 | Q2RMZ4 | + | 242296 - 243528 | 43692.5 |
| trm112 family protein | AFIC_000224 | Q2J3F5 | - | 243532 - 243735 | 7307.91 |
| lon peptidase substrate-binding domain-containing protein | AFIC_000225 | A9GBF1 | - | 243762 - 244436 | 24834.9 |
| thioredoxin | AFIC_000226 | Q4UNK3 | - | 244465 - 245370 | 32183.3 |
| Trna-gly | Not Available | Not Available | + | 245593 - 245667 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
