Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | AFIC_000208 | B6JAI4 | - | 224173 - 226800 | 97524.2 |
| diguanylate cyclase | AFIC_000209 | Q55434 | - | 226907 - 228598 | 61251.3 |
| yggs family pyridoxal phosphate-dependent enzyme | AFIC_000210 | P24562 | + | 228711 - 229400 | 24645.6 |
| l,d-transpeptidase family protein | AFIC_000211 | Not Available | - | 229537 - 230106 | 21360.8 |
| response regulator transcription factor | AFIC_000212 | A0QTK2 | + | 230228 - 230914 | 25156.1 |
| cyclic nucleotide-binding domain-containing protein | AFIC_000213 | Q2UDH2 | + | 230977 - 231417 | 15754.0 |
| exodeoxyribonuclease iii | AFIC_000214 | P09030 | - | 231439 - 232254 | 30776.8 |
| outer membrane lipoprotein carrier protein lola | AFIC_000215 | B1Y153 | - | 232334 - 233164 | 29649.2 |
| dna translocase ftsk 4tm domain-containing protein | AFIC_000216 | Q89WR2 | - | 233275 - 235728 | 88426.1 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | AFIC_000217 | A5FRC5 | - | 235738 - 236970 | 43938.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
