Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease ph | AFIC_000168 | B6JCH9 | + | 184034 - 184750 | 26029.2 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | AFIC_000169 | Q6NCY9 | + | 184750 - 185388 | 22581.9 |
| radical sam family heme chaperone hemw | AFIC_000170 | A4IGH2 | + | 185378 - 186535 | 41986.3 |
| penicillin-binding protein activator | AFIC_000171 | Q9ZCJ2 | - | 186545 - 187753 | 41309.3 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | AFIC_000172 | Q98DM9 | + | 188015 - 188947 | 33421.2 |
| yran family protein | AFIC_000173 | Q1QRV0 | + | 188944 - 189339 | 14448.2 |
| glutathione synthase | AFIC_000174 | P61396 | + | 189371 - 190312 | 34797.0 |
| hypothetical protein | AFIC_000175 | Not Available | + | 190430 - 191248 | 30057.5 |
| yifb family mg chelatase-like aaa atpase | AFIC_000176 | P57015 | + | 191353 - 192891 | 53837.1 |
| hypothetical protein | AFIC_000177 | Not Available | + | 192979 - 193458 | 16817.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
