Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copper oxidase | AFIC_000098 | Q47452 | - | 110388 - 111770 | 50535.3 |
| tolc family protein | AFIC_000099 | Not Available | - | 111770 - 113227 | 53326.6 |
| hypothetical protein | AFIC_000100 | Not Available | - | 113616 - 114110 | 17343.6 |
| metal-sensitive transcriptional regulator | AFIC_000101 | O07434 | - | 114196 - 114471 | 10358.6 |
| heavy metal translocating p-type atpase | AFIC_000102 | Q9ZHC7 | + | 114525 - 116972 | 85626.8 |
| formate/nitrite transporter family protein | AFIC_000103 | Q50568 | + | 117254 - 118135 | 30793.9 |
| cdf family co(ii)/ni(ii) efflux transporter dmef | AFIC_000104 | O07084 | - | 118137 - 119399 | 45990.0 |
| metal/formaldehyde-sensitive transcriptional repressor | AFIC_000105 | P55757 | - | 119413 - 119691 | 10307.6 |
| metal-sensing transcriptional repressor | AFIC_000106 | O07434 | + | 119776 - 120054 | 10344.6 |
| efflux rnd transporter periplasmic adaptor subunit | AFIC_000107 | P13510 | + | 120089 - 121306 | 43264.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
