Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | AFIC_000088 | P77239 | + | 98637 - 100151 | 54320.1 |
| efflux rnd transporter permease subunit | AFIC_000089 | P38054 | + | 100148 - 103348 | 115763.0 |
| copper-binding protein | AFIC_000090 | P77214 | + | 103496 - 103906 | 14174.0 |
| duf411 domain-containing protein | AFIC_000091 | Not Available | - | 104048 - 104581 | 18719.8 |
| copper homeostasis membrane protein copd | AFIC_000092 | P12377 | - | 104584 - 105522 | 33636.8 |
| copper homeostasis periplasmic binding protein copc | AFIC_000093 | Q47454 | - | 105522 - 105920 | 14069.8 |
| duf4396 domain-containing protein | AFIC_000094 | A0A067XMP0 | - | 105917 - 107803 | 69416.3 |
| opgc domain-containing protein | AFIC_000095 | Not Available | - | 107937 - 109139 | 44200.6 |
| copper-binding protein | AFIC_000096 | P77214 | - | 109263 - 109568 | 10940.5 |
| cupredoxin family protein | AFIC_000097 | P21697 | - | 109859 - 110341 | 17477.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
