Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter periplasmic protein lptc | AFIC_000078 | Q92HW0 | - | 86903 - 87607 | 25102.0 |
| ribonuclease d | AFIC_000079 | Q0BVP4 | - | 87723 - 88337 | 22738.2 |
| glycogen/starch/alpha-glucan phosphorylase | AFIC_000080 | P0AC86 | + | 88717 - 91116 | 89433.9 |
| methyl-accepting chemotaxis protein | AFIC_000081 | Q2W4T8 | - | 91174 - 92862 | 59430.6 |
| duf930 domain-containing protein | AFIC_000082 | Not Available | - | 93062 - 93460 | 14734.6 |
| chromate efflux transporter | AFIC_000083 | P14285 | - | 93605 - 94789 | 40979.8 |
| hypothetical protein | AFIC_000084 | Not Available | - | 95161 - 95295 | 4772.31 |
| sigma-70 family rna polymerase sigma factor | AFIC_000085 | G8QM61 | + | 96181 - 96735 | 20623.7 |
| duf1109 domain-containing protein | AFIC_000086 | G8QM60 | + | 96732 - 97373 | 22803.6 |
| hypothetical protein | AFIC_000087 | Not Available | + | 97987 - 98259 | 9790.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
