Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atpase | AFIC_000928 | P73846 | + | 972475 - 973263 | 28621.1 |
| hypothetical protein | AFIC_000929 | Q07404 | + | 973294 - 973992 | 24997.0 |
| Trna-met | Not Available | Not Available | + | 974031 - 974107 | Not Available |
| hypothetical protein | AFIC_000931 | Not Available | - | 974204 - 974572 | 11947.3 |
| methyltransferase domain-containing protein | AFIC_000932 | Q05197 | - | 974636 - 975274 | 23365.3 |
| trna 2-thiouridine(34) synthase mnma | AFIC_000933 | B6JCC3 | - | 975290 - 976471 | 42712.6 |
| flagellar hook-length control protein flik | AFIC_000934 | Not Available | + | 976800 - 978329 | 50771.8 |
| flagellar biosynthesis protein flgd | AFIC_000935 | P0A1J0 | + | 978339 - 979076 | 25068.5 |
| duf1153 domain-containing protein | AFIC_000936 | Not Available | + | 979248 - 979523 | 10277.4 |
| flagellar basal-body ms-ring/collar protein flif | AFIC_000937 | Q04954 | + | 979748 - 981301 | 56486.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
