Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_000918 | Not Available | - | 963023 - 963556 | 20383.6 |
| Trna-sec(p) | Not Available | Not Available | + | 963740 - 963835 | Not Available |
| hypothetical protein | AFIC_000920 | Not Available | + | 963865 - 964359 | 18741.8 |
| hypothetical protein | AFIC_000921 | Not Available | + | 964343 - 964753 | 15635.6 |
| selenide, water dikinase seld | AFIC_000922 | Q931D0 | - | 964843 - 965892 | 36050.5 |
| amp-binding protein | AFIC_000923 | O07610 | + | 966451 - 967986 | 55095.3 |
| lactate racemase domain-containing protein | AFIC_000924 | D9TQ02 | + | 967983 - 969398 | 51999.7 |
| nickel pincer cofactor biosynthesis protein larb | AFIC_000925 | F9UST0 | + | 969419 - 970120 | 24845.1 |
| abc transporter substrate-binding protein | AFIC_000926 | Not Available | + | 970217 - 971179 | 34509.7 |
| larc family nickel insertion protein | AFIC_000927 | A5GDB2 | + | 971180 - 972478 | 46706.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
