Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_000898 | Not Available | + | 938802 - 938939 | 4899.1 |
| rrf2 family transcriptional regulator | AFIC_000899 | Q65M01 | - | 938947 - 939399 | 16559.3 |
| hypothetical protein | AFIC_000900 | Not Available | + | 939590 - 939745 | 5270.79 |
| duf1971 domain-containing protein | AFIC_000901 | P45134 | + | 939772 - 940077 | 11305.5 |
| chloride channel protein | AFIC_000902 | Q8XTT4 | + | 940334 - 942079 | 62240.9 |
| molybdopterin oxidoreductase family protein | AFIC_000903 | D3RNN8 | + | 942318 - 945311 | 111362.0 |
| cytochrome ubiquinol oxidase subunit i | AFIC_000904 | D3RNN7 | + | 945326 - 945931 | 22025.9 |
| dimethyl sulfoxide reductase anchor subunit | AFIC_000905 | D3RNN6 | + | 946076 - 947023 | 33738.0 |
| abc transporter substrate-binding protein | AFIC_000906 | P75853 | + | 947530 - 948522 | 36250.2 |
| l-2-hydroxyglutarate oxidase | AFIC_000907 | P37339 | + | 948598 - 949806 | 43652.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
