Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large subunit | AFIC_000878 | Q98I87 | - | 915200 - 918529 | 119996.0 |
| Trna-undet | Not Available | Not Available | + | 918812 - 918888 | Not Available |
| class i sam-dependent methyltransferase | AFIC_000880 | Not Available | - | 918989 - 919678 | 24733.0 |
| dna starvation/stationary phase protection protein | AFIC_000881 | P73321 | + | 919840 - 920331 | 18590.9 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | AFIC_000882 | Q89DR8 | - | 920399 - 921589 | 42526.8 |
| gatb/yqey domain-containing protein | AFIC_000883 | P54464 | + | 921772 - 922227 | 16137.7 |
| n-formylglutamate amidohydrolase | AFIC_000884 | O31201 | - | 922243 - 923043 | 29627.4 |
| mfs transporter | AFIC_000885 | P96675 | - | 923054 - 924241 | 41708.2 |
| dna primase | AFIC_000886 | Q9I5W0 | + | 924414 - 926408 | 72387.0 |
| rna polymerase sigma factor rpod | AFIC_000887 | P33452 | + | 926731 - 928860 | 79529.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
