Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coa transferase subunit a | AFIC_000858 | B0RVK4 | + | 898243 - 898944 | 25179.5 |
| 3-oxoacid coa-transferase subunit b | AFIC_000859 | B0RVK3 | + | 898960 - 899607 | 22786.7 |
| pas domain-containing protein | AFIC_000860 | A6X5X4 | - | 899614 - 902712 | 109957.0 |
| phasin family protein | AFIC_000861 | Not Available | + | 903021 - 903395 | 13513.9 |
| phasin | AFIC_000862 | Not Available | + | 903544 - 903969 | 14892.3 |
| Trna-his | Not Available | Not Available | + | 904175 - 904251 | Not Available |
| ynfa family protein | AFIC_000864 | Q1QLU4 | - | 904293 - 904613 | 11226.0 |
| hypothetical protein | AFIC_000865 | Not Available | - | 904639 - 905139 | 17380.5 |
| merr family transcriptional regulator | AFIC_000866 | Q9HV30 | + | 905222 - 905632 | 15054.9 |
| nickel/cobalt efflux transporter | AFIC_000867 | Q3Z0A4 | - | 905673 - 906737 | 38745.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
