Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | AFIC_000848 | P52559 | - | 886963 - 888060 | 39071.8 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | AFIC_000849 | Q8FYW3 | - | 888070 - 888546 | 16111.7 |
| duf465 domain-containing protein | AFIC_000850 | Not Available | - | 888693 - 888947 | 9718.66 |
| duf465 domain-containing protein | AFIC_000851 | Not Available | + | 889139 - 889324 | 7093.8 |
| nad(p)/fad-dependent oxidoreductase | AFIC_000852 | A0A0M7LBC1 | - | 889388 - 890497 | 39028.7 |
| eal domain-containing protein | AFIC_000853 | Q9ABX9 | + | 890679 - 893009 | 86020.0 |
| abc transporter atp-binding protein | AFIC_000854 | P31134 | + | 893167 - 894258 | 38594.9 |
| abc transporter permease | AFIC_000855 | P31135 | + | 894255 - 895166 | 33949.4 |
| abc transporter permease | AFIC_000856 | P0AFL2 | + | 895166 - 895981 | 28710.6 |
| asma family protein | AFIC_000857 | Not Available | - | 895984 - 897894 | 66506.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
