Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | AFIC_000838 | Q2RSB4 | + | 877035 - 878441 | 48179.7 |
| hypothetical protein | AFIC_000839 | P55471 | + | 878490 - 879572 | 37816.7 |
| hypothetical protein | AFIC_000840 | Not Available | + | 879624 - 880007 | 13424.5 |
| hypothetical protein | AFIC_000841 | Not Available | - | 880096 - 880359 | 9813.42 |
| lps-assembly protein lptd | AFIC_000842 | Not Available | + | 880363 - 881562 | 43734.9 |
| hypothetical protein | AFIC_000843 | Not Available | + | 881672 - 882547 | 29760.4 |
| helix-turn-helix transcriptional regulator | AFIC_000844 | O32207 | - | 882702 - 883901 | 44517.8 |
| aldehyde dehydrogenase family protein | AFIC_000845 | O34660 | + | 884034 - 885524 | 53148.9 |
| cytochrome ubiquinol oxidase subunit i | AFIC_000846 | Q6N274 | - | 885720 - 885923 | 8070.07 |
| aquaporin z | AFIC_000847 | P60925 | + | 886194 - 886910 | 24271.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
