Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h:quinone oxidoreductase | AFIC_000818 | B6JBZ6 | - | 858715 - 859314 | 20940.0 |
| pirin family protein | AFIC_000819 | P58113 | - | 859469 - 860170 | 25115.4 |
| 3-oxoacyl-acp reductase fabg | AFIC_000820 | P39333 | - | 860244 - 860993 | 25348.0 |
| lysr family transcriptional regulator | AFIC_000821 | P43011 | + | 861104 - 862033 | 33540.0 |
| type b 50s ribosomal protein l36 | AFIC_000822 | Q07J43 | + | 862262 - 862387 | 5033.35 |
| tetratricopeptide repeat protein | AFIC_000823 | Q2K4E6 | + | 862496 - 863128 | 23375.2 |
| hypothetical protein | AFIC_000824 | Not Available | + | 863209 - 863589 | 13718.4 |
| pyruvate kinase | AFIC_000825 | O05118 | - | 863592 - 865028 | 51329.1 |
| duf1036 domain-containing protein | AFIC_000826 | Not Available | - | 865025 - 865600 | 20981.9 |
| duf1244 domain-containing protein | AFIC_000827 | Not Available | + | 865746 - 866048 | 11232.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
