Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | AFIC_000808 | A7MFJ6 | - | 847552 - 848355 | 28825.7 |
| gluconokinase | AFIC_000809 | B0BML1 | - | 848352 - 848891 | 19425.5 |
| 6-phosphogluconolactonase | AFIC_000810 | Q9XAB7 | - | 848891 - 849625 | 26713.7 |
| glucose-6-phosphate dehydrogenase | AFIC_000811 | P29686 | - | 849628 - 851154 | 56954.2 |
| decarboxylating 6-phosphogluconate dehydrogenase | AFIC_000812 | G5EBD7 | - | 851169 - 852203 | 37558.8 |
| bifunctional transaldolase/phosoglucose isomerase | AFIC_000813 | Q118F4 | - | 852213 - 855056 | 101927.0 |
| transketolase | AFIC_000814 | A0A0I9QGZ2 | - | 855053 - 857146 | 75831.2 |
| yhcb family protein | AFIC_000815 | Not Available | + | 857293 - 857391 | 3575.59 |
| duf3297 family protein | AFIC_000816 | Not Available | + | 857456 - 857698 | 9122.86 |
| haloacid dehalogenase type ii | AFIC_000817 | Q60099 | - | 857699 - 858436 | 27375.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
