Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_000798 | Not Available | + | 837578 - 837823 | 9080.64 |
| cold-shock protein | AFIC_000799 | P55390 | - | 838009 - 838209 | 7055.38 |
| hypothetical protein | AFIC_000800 | Not Available | - | 838421 - 838669 | 9025.86 |
| ycjf family protein | AFIC_000801 | Q89E33 | - | 838736 - 839806 | 37968.5 |
| ycjx family protein | AFIC_000802 | P76046 | - | 839803 - 841266 | 53776.5 |
| hemolysin iii family protein | AFIC_000803 | P67155 | + | 841466 - 842152 | 24730.7 |
| lysr substrate-binding domain-containing protein | AFIC_000804 | P70785 | - | 842156 - 843067 | 34095.6 |
| mfs transporter | AFIC_000805 | Q44470 | + | 843202 - 844515 | 46589.8 |
| tartrate dehydrogenase | AFIC_000806 | P70792 | + | 844521 - 845594 | 38825.4 |
| glycoside hydrolase family 15 protein | AFIC_000807 | P71741 | + | 845747 - 847555 | 67798.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
