Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tellurite resistance/c4-dicarboxylate transporter family protein | AFIC_000768 | P9WLS4 | - | 805122 - 806171 | 39279.8 |
| cysteine synthase a | AFIC_000769 | P73410 | + | 806372 - 807385 | 35670.3 |
| fad-dependent oxidoreductase | AFIC_000770 | O34292 | + | 807411 - 808457 | 38412.4 |
| ubix family flavin prenyltransferase | AFIC_000771 | P57767 | - | 808462 - 809067 | 21610.2 |
| ubid family decarboxylase | AFIC_000772 | A1KVA2 | - | 809064 - 810590 | 56903.0 |
| scp2 sterol-binding domain-containing protein | AFIC_000773 | Not Available | + | 810716 - 811267 | 19438.7 |
| u32 family peptidase | AFIC_000774 | P45527 | + | 811258 - 812235 | 34863.2 |
| u32 family peptidase | AFIC_000775 | P45475 | + | 812285 - 813214 | 33798.8 |
| hypothetical protein | AFIC_000776 | Not Available | + | 813253 - 813651 | 15069.2 |
| oxygen-independent coproporphyrinogen iii oxidase | AFIC_000777 | O31381 | - | 813661 - 815037 | 51016.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
