Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | AFIC_000718 | Q2YIG0 | + | 755864 - 756514 | 22632.6 |
| hypothetical protein | AFIC_000719 | Not Available | + | 756703 - 757026 | 11113.4 |
| saccharopine dehydrogenase nadp-binding domain-containing protein | AFIC_000720 | O32323 | - | 757080 - 758528 | 53365.1 |
| cation diffusion facilitator family transporter | AFIC_000721 | O07084 | - | 758671 - 759672 | 35614.7 |
| nucleoside diphosphate kinase regulator | AFIC_000722 | P0AFW6 | - | 759769 - 760173 | 14600.4 |
| rida family protein | AFIC_000723 | P16251 | - | 760471 - 760860 | 13981.8 |
| n-acetyltransferase | AFIC_000724 | P63419 | - | 760913 - 761521 | 21326.0 |
| type iii plp-dependent enzyme | AFIC_000725 | O50657 | - | 761646 - 762788 | 41826.4 |
| hypothetical protein | AFIC_000726 | Not Available | - | 763450 - 763710 | 9001.15 |
| m3 family metallopeptidase | AFIC_000727 | P24171 | + | 763839 - 765941 | 78195.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
