Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter atp-binding protein/permease | AFIC_000708 | P0A9S8 | + | 746416 - 748284 | 67253.8 |
| abc transporter atp-binding protein | AFIC_000709 | P21630 | + | 748281 - 748979 | 25542.2 |
| hit domain-containing protein | AFIC_000710 | F4K1R2 | - | 749054 - 749479 | 15704.3 |
| substrate-binding domain-containing protein | AFIC_000711 | A0A0A1H8I4 | - | 749511 - 750269 | 26683.9 |
| superoxide dismutase | AFIC_000712 | Q9XD74 | + | 750471 - 751070 | 22379.4 |
| fluoride efflux transporter crcb | AFIC_000713 | Q1QHY7 | + | 751188 - 751562 | 12875.1 |
| abc transporter atp-binding protein | AFIC_000714 | O34338 | + | 751937 - 752692 | 27081.6 |
| metal abc transporter permease | AFIC_000715 | Q92AG0 | + | 752692 - 753558 | 30117.2 |
| gtp-binding protein | AFIC_000716 | Q8VEH6 | + | 753653 - 754750 | 41004.6 |
| hypothetical protein | AFIC_000717 | Not Available | + | 754761 - 755774 | 35425.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
