Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | + | 736456 - 737942 | Not Available |
| Trna-ile | Not Available | Not Available | + | 738134 - 738210 | Not Available |
| Trna-ala | Not Available | Not Available | + | 738243 - 738318 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 738722 - 741537 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 741606 - 741720 | Not Available |
| hypothetical protein | AFIC_000703 | Not Available | + | 741959 - 742552 | 21076.2 |
| Trna-met | Not Available | Not Available | + | 742822 - 742898 | Not Available |
| hded family acid-resistance protein | AFIC_000705 | Not Available | - | 742985 - 743548 | 20134.4 |
| substrate-binding protein | AFIC_000706 | Q2YK58 | + | 744026 - 745375 | 48795.3 |
| branched-chain amino acid abc transporter permease | AFIC_000707 | P0AEX8 | + | 745527 - 746402 | 30904.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
