Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2125 domain-containing protein | AFIC_000688 | Not Available | + | 722950 - 724149 | 43214.0 |
| prephenate/arogenate dehydrogenase family protein | AFIC_000689 | Q04983 | - | 724159 - 725112 | 33865.6 |
| histidinol-phosphate transaminase | AFIC_000690 | Q1QQD5 | - | 725109 - 726203 | 38922.8 |
| chorismate mutase | AFIC_000691 | Q9ZHY3 | - | 726222 - 727070 | 30217.1 |
| homoserine o-acetyltransferase | AFIC_000692 | Q1QQD3 | + | 727348 - 728556 | 43945.8 |
| methionine biosynthesis protein metw | AFIC_000693 | Q7UG04 | + | 728558 - 729211 | 24427.4 |
| tigr02594 family protein | AFIC_000694 | Not Available | + | 729453 - 730040 | 20773.7 |
| mosc domain-containing protein | AFIC_000695 | Not Available | - | 730037 - 730807 | 28024.7 |
| atp-dependent chaperone clpb | AFIC_000696 | Q6N1H2 | + | 730988 - 733624 | 96235.3 |
| m23 family metallopeptidase | AFIC_000697 | P44693 | - | 733702 - 735774 | 73761.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
