Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | AFIC_000678 | Not Available | + | 713448 - 713750 | 10346.4 |
| diaminopimelate decarboxylase | AFIC_000679 | Q9Z661 | + | 713757 - 715022 | 45122.4 |
| tigr02302 family protein | AFIC_000680 | Not Available | + | 715124 - 717640 | 91572.5 |
| response regulator | AFIC_000681 | A0R3I8 | - | 717634 - 718014 | 13462.3 |
| zinc-ribbon domain-containing protein | AFIC_000682 | Not Available | - | 718014 - 718874 | 31377.9 |
| cell division atp-binding protein ftse | AFIC_000683 | P0A9R9 | + | 719046 - 719705 | 24733.5 |
| abc transporter permease | AFIC_000684 | P44872 | + | 719729 - 720661 | 32615.4 |
| ydcf family protein | AFIC_000685 | Not Available | + | 720793 - 721476 | 25128.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AFIC_000686 | O35083 | + | 721482 - 722243 | 28738.4 |
| gamma-glutamylcyclotransferase | AFIC_000687 | P39163 | - | 722256 - 722840 | 21978.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
