Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-lactate permease | AFIC_000658 | Q46839 | - | 692687 - 694402 | 60880.9 |
| lysr substrate-binding domain-containing protein | AFIC_000659 | Q04778 | + | 694670 - 695545 | 32352.3 |
| aminotransferase class v-fold plp-dependent enzyme | AFIC_000660 | P55819 | + | 695708 - 696922 | 43692.5 |
| fad-binding protein | AFIC_000661 | A0A0H3KZS3 | + | 697056 - 699998 | 107111.0 |
| mandelate racemase | AFIC_000662 | P11444 | + | 699995 - 701110 | 39353.6 |
| carbon-nitrogen hydrolase family protein | AFIC_000663 | Q89GE3 | + | 701153 - 702187 | 37313.3 |
| hnh endonuclease | AFIC_000664 | Q6NKI3 | - | 702327 - 702770 | 17130.3 |
| dna-3-methyladenine glycosylase 2 family protein | AFIC_000665 | P9WJW2 | - | 702974 - 703747 | 27993.9 |
| trna glutamyl-q(34) synthetase gluqrs | AFIC_000666 | O68142 | + | 703784 - 704668 | 32714.1 |
| atp-binding protein | AFIC_000667 | P0C0F7 | + | 704715 - 705983 | 44275.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
