Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyttr family transcriptional regulator dna-binding domain-containing protein | AFIC_000648 | Q9I310 | + | 680777 - 682063 | 46255.1 |
| xanthine dehydrogenase family protein subunit m | AFIC_000649 | P19920 | + | 682219 - 683097 | 30878.6 |
| carbon monoxide dehydrogenase small subunit | AFIC_000650 | P19921 | + | 683118 - 683618 | 17818.5 |
| aerobic carbon-monoxide dehydrogenase large subunit | AFIC_000651 | P19919 | + | 683615 - 686044 | 88707.1 |
| moxr family atpase | AFIC_000652 | Q02239 | + | 686081 - 686968 | 33260.1 |
| vwa domain-containing protein | AFIC_000653 | Not Available | + | 687289 - 688173 | 32701.4 |
| xdhc/coxi family protein | AFIC_000654 | Q46808 | + | 688195 - 689022 | 28797.7 |
| carbon monoxide dehydrogenase subunit g | AFIC_000655 | Not Available | + | 689022 - 689639 | 21623.0 |
| lyttr family transcriptional regulator dna-binding domain-containing protein | AFIC_000656 | Q9I310 | + | 690056 - 691228 | 41396.6 |
| xdhc family protein | AFIC_000657 | P77183 | + | 691563 - 692576 | 36925.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
