Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyl-atp diphosphatase | AFIC_000628 | Q938W0 | + | 660710 - 661102 | 14231.2 |
| deda family protein | AFIC_000629 | P44832 | + | 661165 - 661746 | 21392.6 |
| hypothetical protein | AFIC_000630 | Not Available | + | 661870 - 662400 | 18011.3 |
| ggdef domain-containing protein | AFIC_000631 | Q9KKZ4 | + | 662639 - 663697 | 39071.3 |
| duf3551 domain-containing protein | AFIC_000632 | Not Available | - | 663705 - 663959 | 9475.26 |
| methyl-accepting chemotaxis protein | AFIC_000633 | Q2W4T8 | + | 664697 - 666403 | 60092.0 |
| Trna-leu | Not Available | Not Available | + | 666675 - 666759 | Not Available |
| disulfide bond formation protein b | AFIC_000635 | Q12AY6 | + | 666895 - 667431 | 19023.3 |
| psif family protein | AFIC_000636 | Not Available | - | 667525 - 667749 | 7741.42 |
| hypothetical protein | AFIC_000637 | Not Available | + | 667970 - 668407 | 14326.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
