Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfate abc transporter permease subunit cysw | AFIC_000618 | P0AEB1 | + | 649152 - 650030 | 31362.1 |
| sulfate abc transporter atp-binding protein | AFIC_000619 | Q6NBT1 | + | 650020 - 651066 | 38279.0 |
| cap domain-containing protein | AFIC_000620 | O31398 | + | 651159 - 651662 | 17582.1 |
| 3-hydroxybutyrate dehydrogenase | AFIC_000621 | O86034 | + | 651747 - 652535 | 27540.3 |
| lipopolysaccharide biosynthesis protein | AFIC_000622 | D4GU68 | - | 652545 - 653912 | 49679.8 |
| duf924 domain-containing protein | AFIC_000623 | Not Available | - | 654003 - 654551 | 20580.2 |
| long-chain-fatty-acid--coa ligase | AFIC_000624 | P69452 | - | 654719 - 656401 | 61366.3 |
| serine hydrolase | AFIC_000625 | P44466 | - | 656547 - 658001 | 50895.1 |
| glucan abc transporter atp-binding protein/ permease | AFIC_000626 | Q20Z38 | - | 658200 - 660137 | 70992.1 |
| hypothetical protein | AFIC_000627 | Not Available | + | 660191 - 660595 | 14334.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
