Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | AFIC_000588 | Q55900 | - | 620832 - 622097 | 45185.1 |
| cpad family pilus assembly protein | AFIC_000589 | Not Available | - | 622094 - 622834 | 26395.4 |
| type ii and iii secretion system protein family protein | AFIC_000590 | P55702 | - | 622855 - 624309 | 50822.8 |
| prepilin peptidase | AFIC_000591 | Not Available | - | 624443 - 624967 | 18803.5 |
| flp family type ivb pilin | AFIC_000592 | Not Available | - | 625257 - 625427 | 5669.92 |
| flp pilus assembly protein cpab | AFIC_000593 | Not Available | + | 625793 - 626617 | 28700.1 |
| pilus assembly protein | AFIC_000594 | Not Available | + | 626772 - 627317 | 19830.0 |
| pilus assembly protein | AFIC_000595 | Not Available | + | 627338 - 627922 | 20872.0 |
| cold-shock protein | AFIC_000596 | P55390 | - | 628043 - 628255 | 7505.81 |
| cytochrome ubiquinol oxidase subunit i | AFIC_000597 | Q1QR57 | - | 628540 - 628755 | 8304.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
