Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | AFIC_000578 | P55691 | + | 608331 - 610193 | 69568.3 |
| microcin c abc transporter permease yejb | AFIC_000579 | P0AFU1 | + | 610197 - 611303 | 40809.2 |
| abc transporter permease | AFIC_000580 | P33915 | + | 611375 - 612472 | 41085.3 |
| abc transporter atp-binding protein | AFIC_000581 | P33916 | + | 612478 - 614115 | 59555.5 |
| c40 family peptidase | AFIC_000582 | P39043 | - | 614122 - 614979 | 30890.8 |
| leucyl aminopeptidase family protein | AFIC_000583 | A7NG41 | - | 614972 - 616348 | 48788.3 |
| tetratricopeptide repeat protein | AFIC_000584 | Not Available | + | 616502 - 617311 | 28449.7 |
| type ii secretion system f family protein | AFIC_000585 | Not Available | - | 617373 - 618350 | 36566.7 |
| type ii secretion system f family protein | AFIC_000586 | Not Available | - | 618361 - 619335 | 35816.5 |
| cpaf family protein | AFIC_000587 | P9WMT2 | - | 619347 - 620708 | 49750.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
