Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase | AFIC_000568 | Q56WD9 | + | 594045 - 595232 | 41165.9 |
| glycerol kinase glpk | AFIC_000569 | B6JJF0 | + | 595345 - 596877 | 55296.8 |
| hypothetical protein | AFIC_000570 | Not Available | - | 596887 - 597417 | 19049.2 |
| methionine synthase | AFIC_000571 | Q9I2Q2 | - | 597643 - 601491 | 140715.0 |
| methylenetetrahydrofolate reductase | AFIC_000572 | P11003 | - | 601552 - 602457 | 32921.9 |
| llm class flavin-dependent oxidoreductase | AFIC_000573 | O34504 | + | 602781 - 603800 | 37098.5 |
| prephenate dehydratase | AFIC_000574 | D3U716 | - | 603901 - 604764 | 30726.7 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | AFIC_000575 | B6JJE4 | - | 604773 - 605516 | 26594.2 |
| cytochrome c family protein | AFIC_000576 | P30323 | + | 605737 - 606252 | 17867.6 |
| extracellular solute-binding protein | AFIC_000577 | P55691 | + | 606451 - 608334 | 71132.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
