Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | AFIC_000028 | Not Available | + | 29756 - 30433 | 23570.2 |
| translation initiation factor if-2 | AFIC_000029 | Q3SWP9 | + | 30475 - 33078 | 93370.7 |
| 30s ribosome-binding factor rbfa | AFIC_000030 | B6JCS1 | + | 33230 - 33655 | 15607.6 |
| trna pseudouridine(55) synthase trub | AFIC_000031 | Q89WB1 | + | 33655 - 34740 | 39037.4 |
| 30s ribosomal protein s15 | AFIC_000032 | B6JCR9 | + | 34752 - 35021 | 10197.3 |
| polyribonucleotide nucleotidyltransferase | AFIC_000033 | B6JCR8 | + | 35319 - 37463 | 77323.4 |
| superoxide dismutase | AFIC_000034 | P50059 | + | 37613 - 38362 | 27054.3 |
| lysr substrate-binding domain-containing protein | AFIC_000035 | Q9X725 | - | 38396 - 39319 | 33802.1 |
| catalase/peroxidase hpi | AFIC_000036 | Q1QS58 | + | 39505 - 41694 | 80430.1 |
| glutathione s-transferase family protein | AFIC_000037 | P04907 | + | 41888 - 42478 | 21596.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
