Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit gamma/tau | AFIC_000538 | P06710 | + | 566492 - 568345 | 66671.5 |
| ybab/ebfc family nucleoid-associated protein | AFIC_000539 | B6JJQ2 | + | 568364 - 568681 | 11535.1 |
| recombination mediator recr | AFIC_000540 | B6JJQ1 | + | 568683 - 569288 | 21525.1 |
| mfs transporter | AFIC_000541 | P0AE17 | - | 569290 - 570642 | 47879.6 |
| dna recombination protein rmuc | AFIC_000542 | Q9PG89 | - | 570707 - 571909 | 44403.6 |
| peptide deformylase | AFIC_000543 | B6JJP8 | + | 572048 - 572563 | 19257.4 |
| methionyl-trna formyltransferase | AFIC_000544 | B6JJP7 | + | 572575 - 573507 | 33284.0 |
| trna pseudouridine(38-40) synthase trua | AFIC_000545 | B6JJP6 | + | 573507 - 574244 | 27316.5 |
| hypothetical protein | AFIC_000546 | B0URX4 | - | 574238 - 574810 | 20791.8 |
| succinyl-diaminopimelate desuccinylase | AFIC_000547 | B6JJP4 | - | 574821 - 575975 | 41114.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
