Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxykinase | AFIC_000518 | B6JJT0 | + | 544110 - 545726 | 58369.3 |
| hypothetical protein | AFIC_000519 | Not Available | + | 545872 - 546315 | 16762.8 |
| duf2865 domain-containing protein | AFIC_000520 | Not Available | - | 546328 - 547131 | 27825.2 |
| sodium:proton antiporter | AFIC_000521 | Not Available | - | 547247 - 548686 | 51606.8 |
| orotate phosphoribosyltransferase | AFIC_000522 | Q2J1V2 | - | 548693 - 549253 | 19909.1 |
| lyse family translocator | AFIC_000523 | P0AG36 | - | 549361 - 549996 | 22374.8 |
| dna polymerase i | AFIC_000524 | Q9S1G2 | - | 550016 - 553048 | 110841.0 |
| hypothetical protein | AFIC_000525 | Not Available | + | 553163 - 553774 | 23984.4 |
| acyltransferase family protein | AFIC_000526 | P75955 | - | 553783 - 554844 | 39605.1 |
| udp-glucose/gdp-mannose dehydrogenase family protein | AFIC_000527 | O54068 | + | 555026 - 556336 | 47099.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
