Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel | AFIC_000498 | P39285 | - | 525550 - 526899 | 48345.5 |
| potassium/proton antiporter | AFIC_000499 | A4XPR4 | + | 527131 - 528924 | 63689.6 |
| abc transporter atp-binding protein | AFIC_000500 | Q0SIB7 | - | 528943 - 529728 | 27709.7 |
| iron abc transporter permease | AFIC_000501 | O34451 | - | 529725 - 530732 | 34160.0 |
| abc transporter substrate-binding protein | AFIC_000502 | Q6D1Z3 | + | 530825 - 531667 | 29916.4 |
| molybdenum abc transporter atp-binding protein | AFIC_000503 | Q98KI3 | - | 531672 - 532337 | 24404.7 |
| molybdate abc transporter permease subunit | AFIC_000504 | P0AF02 | - | 532339 - 533034 | 24723.9 |
| molybdate abc transporter substrate-binding protein | AFIC_000505 | Q8PHA1 | - | 533053 - 533865 | 28153.7 |
| hypothetical protein | AFIC_000506 | Not Available | - | 534121 - 534624 | 17352.0 |
| tobe domain-containing protein | AFIC_000507 | P38366 | - | 534624 - 534833 | 7163.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
