Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | AFIC_000488 | P40719 | + | 513344 - 514642 | 46261.7 |
| cytochrome ubiquinol oxidase subunit i | AFIC_000489 | Q46087 | + | 515081 - 516571 | 56413.8 |
| is21-like element helper atpase istb | AFIC_000490 | Q45619 | + | 516580 - 517434 | 31416.6 |
| 3'-5' exonuclease | AFIC_000491 | Q1WUF9 | + | 517457 - 518158 | 26663.7 |
| hypothetical protein | AFIC_000492 | Not Available | - | 518284 - 520101 | 68345.4 |
| hypothetical protein | AFIC_000493 | Not Available | - | 520225 - 520992 | 28192.6 |
| cytochrome ubiquinol oxidase subunit i | AFIC_000494 | P45423 | - | 521463 - 522455 | 38056.7 |
| site-specific integrase | AFIC_000495 | Not Available | - | 522515 - 523768 | 48173.0 |
| dna repair protein radc | AFIC_000496 | Q2J299 | - | 523925 - 524533 | 22627.1 |
| type i methionyl aminopeptidase | AFIC_000497 | Q9ZCD3 | - | 524626 - 525453 | 29824.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
