Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromate resistance protein chrb | AFIC_000478 | P17552 | + | 503983 - 504639 | 24970.6 |
| mfs transporter | AFIC_000479 | Q58713 | + | 504724 - 505947 | 43575.9 |
| phosphatase pap2 family protein | AFIC_000480 | P94571 | + | 506003 - 506560 | 19949.5 |
| helix-turn-helix domain-containing protein | AFIC_000481 | Q9HV30 | - | 506598 - 507203 | 22555.0 |
| heavy metal translocating p-type atpase | AFIC_000482 | P37617 | + | 507469 - 509223 | 59759.6 |
| hypothetical protein | AFIC_000483 | Not Available | - | 509948 - 510256 | 12048.9 |
| hypothetical protein | AFIC_000484 | Not Available | - | 510501 - 510716 | 7465.49 |
| tmem165/gdt1 family protein | AFIC_000485 | Not Available | - | 510713 - 511474 | 26290.0 |
| murr/rpir family transcriptional regulator | AFIC_000486 | A7ZPM7 | + | 511574 - 512452 | 32057.4 |
| response regulator transcription factor | AFIC_000487 | Q9HV32 | + | 512682 - 513347 | 24287.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
