Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_000458 | Not Available | - | 477416 - 478156 | 27293.6 |
| duf3846 domain-containing protein | AFIC_000459 | Not Available | - | 478170 - 478571 | 14750.8 |
| hypothetical protein | AFIC_000460 | Not Available | + | 478726 - 479652 | 34254.9 |
| parb/srx family n-terminal domain-containing protein | AFIC_000461 | Q9ZGR8 | + | 480154 - 482151 | 72814.9 |
| hypothetical protein | AFIC_000462 | Not Available | + | 482340 - 482819 | 18217.3 |
| duf736 domain-containing protein | AFIC_000463 | P55425 | + | 483949 - 484254 | 11052.0 |
| zincin-like metallopeptidase domain-containing protein | AFIC_000464 | P55426 | + | 484322 - 485236 | 33512.9 |
| hypothetical protein | AFIC_000465 | Not Available | - | 485266 - 485592 | 11419.6 |
| chromosome partitioning protein parb | AFIC_000466 | Not Available | - | 486024 - 486959 | 34322.6 |
| parb n-terminal domain-containing protein | AFIC_000467 | Q72H91 | - | 486952 - 487854 | 33561.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
