Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyacid dehydrogenase | AFIC_000428 | A5CAL1 | + | 446648 - 447628 | 35355.8 |
| protease inhibitor inh/omp19 family protein | AFIC_000429 | Not Available | + | 447625 - 448326 | 25214.4 |
| hypothetical protein | AFIC_000430 | Q2J299 | - | 448337 - 448501 | 5638.96 |
| nucleotidyl transferase abieii/abigii toxin family protein | AFIC_000431 | Not Available | - | 449139 - 450179 | 38508.5 |
| duf6088 family protein | AFIC_000432 | Not Available | - | 450176 - 450856 | 24921.3 |
| hypothetical protein | AFIC_000433 | Not Available | + | 451094 - 451588 | 17491.9 |
| hypothetical protein | AFIC_000434 | Not Available | + | 451588 - 451938 | 12396.8 |
| hypothetical protein | AFIC_000435 | Not Available | + | 451935 - 453206 | 46469.1 |
| aaa family atpase | AFIC_000436 | E8PLM2 | + | 454048 - 456030 | 72327.8 |
| atp-dependent helicase | AFIC_000437 | Q05311 | + | 456033 - 457937 | 69999.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
