Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_000418 | Not Available | - | 435437 - 435940 | 17244.1 |
| voc family protein | AFIC_000419 | Q4KLB0 | - | 436183 - 436593 | 14737.4 |
| methyl-accepting chemotaxis protein | AFIC_000420 | Q2W4T8 | + | 436841 - 438769 | 66973.3 |
| Trna-arg | Not Available | Not Available | + | 438994 - 439070 | Not Available |
| fmn-binding glutamate synthase family protein | AFIC_000422 | O34849 | + | 439218 - 440843 | 58871.0 |
| carbohydrate porin | AFIC_000423 | P0A3U4 | - | 440846 - 442768 | 69339.1 |
| creatininase family protein | AFIC_000424 | A0PM51 | - | 443107 - 443919 | 28927.6 |
| abc transporter substrate-binding protein | AFIC_000425 | A9WGD2 | + | 444074 - 445051 | 36124.4 |
| abc transporter atp-binding protein | AFIC_000426 | Q57855 | + | 445048 - 445815 | 27722.4 |
| abc transporter permease | AFIC_000427 | Q57306 | + | 445815 - 446642 | 29429.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
