Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helicase-related protein | AFIC_000408 | O74727 | + | 423884 - 427066 | 115762.0 |
| s4 domain-containing protein | AFIC_000409 | Q44264 | + | 427076 - 427345 | 10050.2 |
| ferredoxin family protein | AFIC_000410 | Q44037 | + | 427438 - 427776 | 12482.6 |
| hypothetical protein | AFIC_000411 | P96659 | + | 428126 - 428953 | 29498.3 |
| m48 family metalloprotease | AFIC_000412 | P66951 | - | 429041 - 430528 | 53908.8 |
| thermonuclease family protein | AFIC_000413 | Not Available | - | 430532 - 431281 | 26511.7 |
| glsb/yeaq/ymge family stress response membrane protein | AFIC_000414 | P64487 | - | 431349 - 431618 | 9325.61 |
| yidb family protein | AFIC_000415 | P09996 | - | 431660 - 432256 | 19506.2 |
| duf6496 domain-containing protein | AFIC_000416 | Not Available | - | 432400 - 432720 | 11683.7 |
| mmpl family transporter | AFIC_000417 | Q58957 | + | 432973 - 435345 | 85003.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
