Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| j domain-containing protein | AFIC_000398 | P29944 | + | 413114 - 413758 | 24342.0 |
| deda family protein | AFIC_000399 | P30149 | - | 413769 - 414410 | 22734.4 |
| cobaltochelatase subunit cobs | AFIC_000400 | P29933 | + | 414700 - 415695 | 37048.2 |
| cobaltochelatase subunit cobt | AFIC_000401 | P29934 | + | 415702 - 417606 | 70624.2 |
| esterase-like activity of phytase family protein | AFIC_000402 | Not Available | + | 417614 - 418654 | 37192.7 |
| tripartite tricarboxylate transporter substrate-binding protein | AFIC_000403 | Q44018 | + | 418869 - 419885 | 36491.2 |
| tripartite tricarboxylate transporter tctb family protein | AFIC_000404 | Not Available | + | 419959 - 420459 | 18290.8 |
| tripartite tricarboxylate transporter permease | AFIC_000405 | P70795 | + | 420506 - 422017 | 52879.4 |
| cytochrome ubiquinol oxidase subunit i | AFIC_000406 | B6J9Z3 | - | 422261 - 422458 | 7298.85 |
| duf3108 domain-containing protein | AFIC_000407 | Not Available | + | 422739 - 423575 | 29258.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
