Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | AFIC_000378 | A4YKT6 | + | 393895 - 394647 | 27781.4 |
| dmt family transporter | AFIC_000379 | Not Available | + | 394751 - 395647 | 31470.7 |
| eama family transporter | AFIC_000380 | P29939 | - | 395644 - 396084 | 15551.4 |
| duf1178 family protein | AFIC_000381 | Not Available | - | 396100 - 396564 | 17079.2 |
| carbon-nitrogen hydrolase family protein | AFIC_000382 | P0DP68 | - | 396561 - 397463 | 32647.8 |
| glutaredoxin 3 | AFIC_000383 | P73492 | - | 397460 - 397735 | 9923.71 |
| comf family protein | AFIC_000384 | Q8X715 | - | 397767 - 398567 | 28697.9 |
| methyltransferase domain-containing protein | AFIC_000385 | O80543 | + | 398657 - 399505 | 31086.6 |
| 8-oxo-dgtp diphosphatase mutt | AFIC_000386 | P77788 | - | 399519 - 399920 | 14951.3 |
| bifunctional glutamate n-acetyltransferase/amino-acid acetyltransferase argj | AFIC_000387 | P59610 | - | 399996 - 401231 | 42678.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
