Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | AFIC_000368 | Not Available | - | 383685 - 384128 | 15909.8 |
| hydroxyacylglutathione hydrolase | AFIC_000369 | Q1QQZ1 | - | 384128 - 384895 | 28219.9 |
| class i sam-dependent methyltransferase | AFIC_000370 | P05447 | + | 385009 - 385752 | 27933.2 |
| duf4167 domain-containing protein | AFIC_000371 | Not Available | - | 385768 - 386457 | 25653.1 |
| peptide chain release factor n(5)-glutamine methyltransferase | AFIC_000372 | Q89XT8 | - | 386931 - 387809 | 30552.8 |
| peptide chain release factor 1 | AFIC_000373 | B6JA06 | - | 387806 - 388882 | 39038.5 |
| phosphoenolpyruvate--protein phosphotransferase | AFIC_000374 | P37178 | - | 388819 - 391227 | 88729.1 |
| naat family transporter | AFIC_000375 | O32244 | - | 391321 - 392001 | 23772.7 |
| aspartate kinase | AFIC_000376 | O69077 | - | 392018 - 393274 | 44875.4 |
| ph domain-containing protein | AFIC_000377 | Not Available | + | 393415 - 393882 | 16751.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
