Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aliphatic sulfonate abc transporter substrate-binding protein | AFIC_000348 | P75853 | + | 362557 - 363531 | 35225.4 |
| abc transporter permease | AFIC_000349 | P40401 | + | 363677 - 364519 | 29968.6 |
| abc transporter atp-binding protein | AFIC_000350 | A0KE71 | + | 364522 - 365304 | 28186.3 |
| osmc family protein | AFIC_000351 | Not Available | + | 365412 - 365924 | 18107.9 |
| dna mismatch repair protein muts | AFIC_000352 | A5ETJ3 | - | 365928 - 368663 | 98223.6 |
| patatin-like phospholipase family protein | AFIC_000353 | Not Available | - | 368751 - 369857 | 40326.7 |
| transcriptional repressor | AFIC_000354 | P0AC51 | + | 370124 - 370549 | 15356.8 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | AFIC_000355 | B6JA27 | + | 370734 - 372026 | 46006.3 |
| na+/h+ antiporter | AFIC_000356 | P9WJI2 | - | 372139 - 373746 | 58362.3 |
| duf1345 domain-containing protein | AFIC_000357 | Not Available | - | 373756 - 374472 | 26032.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
