Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3095 domain-containing protein | AFIC_000338 | Not Available | + | 349769 - 350917 | 41252.9 |
| mbl fold metallo-hydrolase | AFIC_000339 | P75849 | - | 350925 - 351593 | 24003.8 |
| biliverdin-producing heme oxygenase | AFIC_000340 | A0A0H2XEA6 | - | 351676 - 352233 | 20621.8 |
| hypothetical protein | AFIC_000341 | Not Available | - | 352253 - 352483 | 8700.62 |
| actr/prra/rega family redox response regulator transcription factor | AFIC_000342 | A6UEL7 | - | 352591 - 353163 | 20600.8 |
| acts/prrb/regb family redox-sensitive histidine kinase | AFIC_000343 | P0C0Z0 | - | 353255 - 354577 | 47647.1 |
| polyhydroxyalkanoate depolymerase | AFIC_000344 | I3R9Z4 | + | 354815 - 356062 | 46661.4 |
| m48 family metallopeptidase | AFIC_000345 | Not Available | + | 356401 - 357156 | 28568.8 |
| penicillin-binding protein | AFIC_000346 | O66874 | - | 357172 - 359442 | 81227.0 |
| [protein-pii] uridylyltransferase | AFIC_000347 | Q89VX9 | - | 359546 - 362377 | 106371.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
