Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, hydrophobic membrane anchor protein | AFIC_000288 | Q59660 | - | 306767 - 307174 | 14178.9 |
| succinate dehydrogenase, cytochrome b556 subunit | AFIC_000289 | Q59659 | - | 307171 - 307566 | 14428.7 |
| hypothetical protein | AFIC_000290 | Not Available | + | 307861 - 308091 | 8219.41 |
| malonyl-coa synthase | AFIC_000291 | O07610 | - | 308173 - 309702 | 55388.7 |
| ybfb/yjij family mfs transporter | AFIC_000292 | P39381 | - | 309793 - 310989 | 41016.2 |
| 3-isopropylmalate dehydrogenase | AFIC_000293 | Q21CS1 | + | 311115 - 312227 | 39445.9 |
| hypothetical protein | AFIC_000294 | Not Available | - | 312301 - 312672 | 13370.0 |
| aspartate-semialdehyde dehydrogenase | AFIC_000295 | O67716 | + | 312978 - 314012 | 37634.0 |
| carbonic anhydrase | AFIC_000296 | P42737 | - | 314076 - 314765 | 25006.9 |
| coa ester lyase | AFIC_000297 | A4WNM9 | + | 314881 - 315765 | 31385.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
