Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | AFIC_003110 | Q52990 | - | 3211837 - 3212187 | 13088.9 |
| organoarsenical effux mfs transporter arsj | AFIC_003111 | Not Available | - | 3212206 - 3213441 | 43820.6 |
| arsj-associated glyceraldehyde-3-phosphate dehydrogenase | AFIC_003112 | P34918 | - | 3213438 - 3214481 | 37499.9 |
| metalloregulator arsr/smtb family transcription factor | AFIC_003113 | Q8ENQ5 | - | 3214491 - 3215351 | 31223.5 |
| molybdopterin molybdotransferase moea | AFIC_003114 | P45210 | - | 3215583 - 3216869 | 45551.1 |
| arsenate reductase (azurin) large subunit | AFIC_003115 | Q7SIF4 | - | 3216919 - 3219441 | 92112.2 |
| arsenate reductase (azurin) small subunit | AFIC_003116 | Q7SIF3 | - | 3219453 - 3219977 | 18603.1 |
| sigma-54 dependent transcriptional regulator | AFIC_003117 | P25852 | - | 3220247 - 3221581 | 49806.6 |
| hamp domain-containing histidine kinase | AFIC_003118 | A7HD43 | - | 3221571 - 3222989 | 51437.2 |
| phnd/ssua/transferrin family substrate-binding protein | AFIC_003119 | O69052 | - | 3222995 - 3223825 | 30142.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
